The main class for representing particles. More...

#include <box.hpp>

Inheritance diagram for AtomVec:

Public Member Functions
	AtomVec (vector< double > masses)

	AtomVec (uint N, flt mass)

	AtomVec (AtomVec &other)

AtomVec &	vec ()

Atom &	operator[] (cuint n)

Atom &	operator[] (cuint n) const

AtomID	get_id (cuint n)

uint	size () const
	Number of atoms in the group. More...

	~AtomVec ()

Public Member Functions inherited from AtomGroup
virtual Atom &	get (cuint n)

virtual AtomIter	begin ()
	For use in a for loop. More...

virtual AtomIter	end ()

Vec	com () const
	center of mass More...

Vec	com_force () const
	center of mass force (i.e., sum of all forces) More...

Vec	com_velocity () const
	center of mass velocity More...

flt	mass () const
	Mass of the whole group. More...

flt	kinetic_energy (const Vec originvelocity=Vec::Zero()) const
	Total kinetic_energy energy of the group. More...

Vec	momentum () const
	Total momentum. More...

flt	gyradius () const
	\(R_g\) More...

Vec	torque (const Vec loc) const
	Total torque about a given location. More...

Vec	torque () const

flt	moment_about (const Vec axis, const Vec loc) const
	Moment of inertia of the atoms about an axis. More...

flt	moment_about (const Vec axis) const

Vec	angular_momentum (const Vec loc) const
	Angular momentum. More...

Vec	angular_momentum () const

Matrix	moment (const Vec loc) const
	Moment of inertia of the atoms as a whole. More...

Matrix	moment () const

Vec	omega (const Vec loc) const
	Angular velocity. More...

Vec	omega () const

void	add_omega (Vec w, Vec origin)
	Add a given angular velocity to all atoms, by adding to their velocity. More...

void	add_omega (Vec w)

void	reset_L ()
	Reset angular momentum to 0. More...

void	add_velocity (Vec v)
	for resetting. Adds a fixed velocity to all atoms More...

void	reset_com_velocity ()
	Subtracts the center of mass velocity from all atoms. More...

void	randomize_velocities (flt T)
	Randomize velocities, for a specific temperature. More...

void	reset_forces ()
	for timestepping More...

virtual	~AtomGroup ()