#include <interaction.hpp>
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| | AngleTriples (vector< AngleGrouping > triples=vector< AngleGrouping >()) |
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| bool | add (AngleGrouping b, bool replace=true) |
| | Add a triple of atoms. More...
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| bool | add (flt k, flt x0, AtomID a1, AtomID a2, AtomID a3, bool replace=true) |
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| bool | add (flt k, AtomID a1, AtomID a2, AtomID a3, bool replace=true) |
| | Add a triple of atoms with the current angle. More...
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| void | add_forced (AngleGrouping b) |
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| flt | energy (Box &box) |
| | Potential energy due to this Interaction. More...
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| flt | pressure (Box &box) |
| | Partial pressure due to this Interaction. More...
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| void | set_forces (Box &box) |
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| flt | set_forces_get_pressure (Box &box) |
| | Set forces (Atom.f) and return \(P = \sum_{\left<i,j \right>} \vec r_{ij} \cdot \vec F_{ij}\) at the same time (see pressure()). More...
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| uint | size () const |
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| flt | mean_dists () const |
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| flt | std_dists () const |
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| virtual Matrix | stress (Box &box) |
| | The force-moment tensor for the current simulation: More...
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| virtual | ~Interaction () |
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Add a triple of atoms.
If "replace", a previous triple found will be replaced by the new triple. If not "replace" and that triple of atoms is already inserted, an error will be thrown.
Add a triple of atoms with the current angle.
| static Vec AngleTriples::diff |
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Vec |
r1, |
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Vec |
r2 |
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) |
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inlinestaticprotected |
| flt AngleTriples::energy |
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Box & |
box | ) |
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virtual |
| flt AngleTriples::mean_dists |
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const |
| flt AngleTriples::pressure |
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Box & |
box | ) |
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inlinevirtual |
Partial pressure due to this Interaction.
\(P = \sum_{\left<i,j \right>} \vec r_{ij} \cdot \vec F_{ij}\), or equivalently \(P = \sum_i \vec r_i \cdot \vec F_i\)
Note that the full pressure involves all interactions and temperature, and needs to be normalized by \( \frac{1}{dV} \) where \(d\) is the number of dimensions and \(V\) is the volume.
Implements Interaction.
| void AngleTriples::set_forces |
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Box & |
box | ) |
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virtual |
| flt AngleTriples::set_forces_get_pressure |
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Box & |
box | ) |
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inlinevirtual |
Set forces (Atom.f) and return \(P = \sum_{\left<i,j \right>} \vec r_{ij} \cdot \vec F_{ij}\) at the same time (see pressure()).
Reimplemented from Interaction.
| uint AngleTriples::size |
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const |
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inline |
| flt AngleTriples::std_dists |
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const |
The documentation for this class was generated from the following files: